About the Resource
Collaborations
The collaborative Resource projects on the following list were selected based on their capacity to benefit from the Resource's capabilities, their scientific and biomedical relevance, and their ability to challenge the core technology and specific technological aims within the Resource:
Qualitative and Quantitative Analysis of the 3SC Proteome in Diabetes
John W. Baynes, Ph.D.
Department of Chemistry and Biochemistry, and Exercise Science
University of South Carolina, Columbia, South Carolina
Biomarkers of Obesity-Related Chronic Kidney Disease
Samuel E. Bennett, Ph.D.
Environmental and Molecular Toxicology
Oregon State University , Corvallis, Oregon
Proteomics of Life Span Extension in C. Elegans AND
Turnover Rates in the Protein Pool of C. Elegans with Extreme Lifespan
Bart P. Braeckman, Ph.D.
Department of Biology
Ghent University, Ghent, Belgium
Proteomic Study of Hepatic Metabolism Regulated by Hypothalamic Pathways
Christoph Buettner, M.D., Ph.D.
Mount Sinai School of Medicine
Mount Sinai, New York City, New York
Comparative Proteomics to Define Adaptations to Purine Stress in Leishmania
Nicola S. Carter, Ph.D.
Department of Biochemistry and Molecular Biology
Oregon Health and Science University , Portland, Oregon
Does RYGB Alter Circulating Gut-Derived Peptides in Morbidly Obese Patients
Robert N. Cooney, M.D.
Department of Surgery
Upstate Medical University, Syracuse, New York
Misincorporation of Amino Acid Analogs in Selected Human and Murine Proteins
Ronald W. Davis, Ph.D.
Stanford University School of Medicine
Stanford University, Stanford, California
Fatty Acid Synthase and EGFR/HER2 Cross-Talk in Breast Cancer Cells AND
Degradomic and Peptidomic Biomarkers for Early-Stage Breast Cancer
Francisco J. Esteva, M.D., Ph.D.
Department of Breast Medical Oncology,
Division of Cancer Medicine
The University of Texas MD Anderson Cancer Center, Houston, Texas
The RhCMV Proteome - A Comparison of WildType and Mutant
Klaus Frueh, Ph.D.
Vaccine and Gene Therapy Institute
Oregon Health and Science University , Portland, Oregon
Identification of Deafness-Causing Mutations using Proteomics-Identified Candidates
Peter Gillespie, Ph.D.
Department of Otolaryngology
Oregon Health and Science University , Portland, Oregon
Phosphoproteome Analysis of Self-Fusion Regulation in Neurospora Crassa
N. Louise Glass, Ph.D.
Department of Plant and Microbial Biology
University of California, Berkeley
An Omics Approach to Identify PKA Targets in Granulosa Cells
Mary Hunzicker-Dunn, Ph.D.
School of Molecular Biosciences
Washington State University, Pullman, Washington
Comparative Protein Quantification of Long-Lived C. Elegans Variants
Cynthia Kenyon, Ph.D.
Department of Biochemistry and Biophysics
University of California, San Francisco
Proteomic Analysis of Murine Models of Osteoporosis
Robert F. Klein, M.D.
Department of Medicine: Endocrinology, Diabetes, and Clinical Nutrition
Oregon Health and Science University , Portland, Oregon
Phosphoproteomic Analysis of Metastatic Pancreatic Cancer Cells
Richard Klemke, Ph.D.
Department of Pathology and Moores Cancer Center
University of California, San Diego, California
Characterization of the SATB1 Phosphorylations upon Ionization Radiation
Terumi Kohwi-Shigematsu, Ph.D.
Lawrence Berkeley National Laboratory, Berkeley, California
Examination of LIRKO Islets and Serum Using Quantitative Proteomics Approaches
Rohit N. Kulkarni, M.D., Ph.D.
Joslin Diabetes Center, Boston, Massachusetts
Identification of PTMs on Ribokinase from Leishmania Mexicana
Scott Landfear, Ph.D.
Molecular Microbiology and Immunology
Oregon Health and Science University , Portland, Oregon
Pilot Study for Identifying Urinary Prostate Cancer Biomarkers
Alvin Y. Liu, Ph.D.
Department of Urology
University of Washington, Seattle, Washington
Quantitative Proteomics of Alzheimer’s Disease Human Brain
Amanda Myers, Ph.D.
Department of Psychiatry and Behavioral Sciences
Miller School of Medicine , University of Miami, Coral Gables, Florida
The Urine Proteomics of Hypercalciuric Renal Stone Disease
Eric S. Orwoll, M.D., Ph.D.
Department of Medicine: Endocrinology, Diabetes, and Clinical Nutrition
Oregon Health and Science University , Portland, Oregon
Proteomics of Bronchiolitis Obliterans Syndrome in Lung Transplant Patients
David Perkins, M.D.
Department of Medicine
University of California, San Diego , La Jolla, California
System Analysis of Protein Phosphorylation Involved in Sperm Maturation
Kenneth Roberts, Ph.D.
WWAMI Medical Education Program
Washington State University , Pullman, Washington
Analysis of Kaposi's Sarcoma-Associated Herpesvirus Infectious Virion Produced in Oral Epithelium
Timothy M. Rose, Ph.D.
Department of Pediatrics
University of Washington , Seattle, Washington
Determining the Role of PP5 in the HSP90 Chaperone Complex AND
Identification of PP5 Targest in the DNA Damage Response Pathway
Sandra S. Rossie, Ph.D.
Department of Biochemistry
Purdue University, West Lafayette, Indiana
Discovery of Novel Urinary Proteomic Biomarkers in Kidney Transplantation
Minnie M. Sarwal, M.D., Ph.D.
California Pacific Medical Center Research Institute, San Francisco, California
Building Cell Type-Specific Signaling Models in Breast Cancer Cell Lines
Peter Sorger, Ph.D.
Department of Systems Biology
Harvard Medical School , Boston, Massachusetts
Stable Isotope Mass Isotopomer Analysis and MS Approach in Evaluating Protein Synthesis Rate
Ronald Tompkins, M.D., Sc.D.
Center for Computational and Integrative Biology
Massachusetts General Hospital , Boston, Massachusetts
Proteomic Characterization of Cerebrospinal Fluid (CSF) by High Resolution LC-MS/MS
H. Shaw Warren, M.D.
Massachusetts General Hospital East and Harvard University School of Medicine, Charlestown, Massachusetts
Identification and Validation of Protein Profiles Associated with Therapy-Resistance in Breast Cancer by Advanced Mass Spectrometry
Arzu Umar
Erasmus MC
University Medical Center Rotterdam, The Netherlands